Publications
2025
Assessing porosity in cellulose nanofiber-based artificial plant cell walls as a function of salinity
Carbohydr Polym. 2025 Dec 15;370:124296. doi: 10.1016/j.carbpol.2025.124296. Epub 2025 Aug 26. PMID: 41116499.
The interaction of human serum components with model membranes containing phospholipids and lipopolysaccharides
J Colloid Interface Sci. 2025 Jun 15;688:150-160. doi: 10.1016/j.jcis.2025.02.131. Epub 2025 Feb 20. PMID: 39999488.
Reconstitution of DNMT1 complex with hemimethylated DNA, doubly monoubiquitinated PAF15, and PCNA for structural analysis
Int J Biol Macromol. 2025 Aug;319(Pt 2):145401. doi: 10.1016/j.ijbiomac.2025.145401. Epub 2025 Jun 19. PMID: 40543772.
Synthesis of Novel Amphiphilic Fluorinated Polymers for the Dispersion of Hydrophobic Gold Nanoparticles, Quantum Dots, or Highly Fluorinated Molecules in Water
ACS Nanosci Au. 2025 Sep 27;5(6):482-492. doi: 10.1021/acsnanoscienceau.5c00069. PMID: 41426009; PMCID: PMC12715620.
Neuroglia in neurodegeneration: Alzheimer, Parkinson, and Huntington disease
Review. Handb Clin Neurol. 2025;210:9-44. doi: 10.1016/B978-0-443-19102-2.00012-0. PMID: 40148060.
Chromatin compaction scaling with cell size follows a power law from interphase through mitosis
Biophys J. 2025 Nov 4;124(21):3678-3689. doi: 10.1016/j.bpj.2025.09.021. Epub 2025 Sep 18. PMID: 40968535.
Multivalent Interactions between Chaperone and Ribosome-Nascent Chain Complex Revealed by High-Speed AFM and MD Simulations
ACS Nano. 2025 Dec 23;19(50):42275-42287. doi: 10.1021/acsnano.5c13500. Epub 2025 Dec 11. PMID: 41380087; PMCID: PMC12752688.
AQUA Tox: A web tool for predicting aquatic toxicity in rotifer species using intrinsic explainable models
J Hazard Mater. 2025 Jul 15;492:138050. doi: 10.1016/j.jhazmat.2025.138050. Epub 2025 Mar 25. PMID: 40157185.
A binding site for the antibiotic GE81112 in the ribosomal mRNA channel
mBio. 2025 Nov 12;16(11):e0397824. doi: 10.1128/mbio.03978-24. Epub 2025 Oct 24. PMID: 41134047; PMCID: PMC12607687.
Electrophysiological dissection of the ion channel activity of the Pseudomonas aeruginosa ionophore protein toxin Tse5
Chem Phys Lipids. 2025 Mar;267:105472. doi: 10.1016/j.chemphyslip.2025.105472. Epub 2025 Jan 6. PMID: 39778700.
The Pseudomonas aeruginosa Tse4 toxin assembles ion-selective and voltage-sensitive ion channels to couple membrane depolarisation with K+ efflux
PLoS Pathog. 2025 Jun 4;21(6):e1012981. doi: 10.1371/journal.ppat.1012981. PMID: 40465776; PMCID: PMC12169545.
Recognizing past shapes: sex differentiation through deep learning on European Upper Palaeolithic hand stencils
Digital Applications in Archaeology and Cultural Heritage 2025 sep 38, e00453. Doi: 10.1016/j.daach.2025.e00453
Chaperone-Driven Entropic Separation of Amyloid Nanofilament Bundles
Phys. Rev. X. 2025; 15;011041
Structural Basis for Amyloid Fibril Assembly by the Master Cell-Signaling Regulator Receptor-Interacting Protein Kinase 1
Nat Commun. 2025 Oct 30;16(1):9607. doi: 10.1038/s41467-025-64621-6. PMID: 41168207; PMCID: PMC12575786.
Distinctive Membrane Accommodation Traits Underpinning the Neutralization Activity of HIV-1 Antibody against MPER
Mol Pharm. 2025 May 5;22(5):2494-2508. doi: 10.1021/acs.molpharmaceut.4c01341. Epub 2025 Apr 9. PMID: 40202993; PMCID: PMC12056697.
Adhirons are efficient tools to guide antiviral ligand Discovery
Commun Biol. 2025 Nov 26;8(1):1755. doi: 10.1038/s42003-025-09137-x. PMID: 41298844; PMCID: PMC12686443.
The interaction of human serum components with model membranes containing phospholipids and lipopolysaccharides
J Colloid Interface Sci. 2025 Jun 15;688:150-160. doi: 10.1016/j.jcis.2025.02.131. Epub 2025 Feb 20. PMID: 39999488.
The minimal chemotactic cell
Sci Adv. 2025 Jul 25;11(30):eadx9364. doi: 10.1126/sciadv.adx9364. Epub 2025 Jul 25. PMID: 40712034; PMCID: PMC12292904.
Modelling the prebiotic origins of regulation and agency in evolving protocell ecologies
Philos Trans R Soc Lond B Biol Sci. 2025 Oct 2;380(1936):20240287. doi: 10.1098/rstb.2024.0287. Epub 2025 Oct 2. PMID: 41035323; PMCID: PMC12489503.
Quasi-average predictions and regression to the trend: An application to the M6 financial forecasting competition
International Journal of Forecasting, 2025. doi: 10.1016/j.ijforecast.2024.12.006
PTML models of self assembled ligand free nanoparticle catalysts for cross coupling reactions
Sci Rep. 2025 Aug 14;15(1):29895. doi: 10.1038/s41598-025-14080-2. PMID: 40813882; PMCID: PMC12354725.
Transition transferases prime bacterial capsule polymerization
Nat Chem Biol. 2025 Jan;21(1):120-130. doi: 10.1038/s41589-024-01664-8. Epub 2024 Jul 1. PMID: 38951648; PMCID: PMC11666461.
The architecture of membrane structures involved in hepatitis C virus genome replication revealed under close-to-native conditions by cryo-electron tomography
J Gen Virol. 2025 Nov;106(11). doi: 10.1099/jgv.0.002168. PMID: 41196697.
A transient contractile seam promotes epithelial sealing and sequential assembly of body segments
Nat Commun. 2025 Apr 29;16(1):4010. doi: 10.1038/s41467-025-58566-z. PMID: 40301337; PMCID: PMC12041241.
Hydrogen-bond-assisted conformational selection of picaridin in the gas phase
Phys Chem Chem Phys. 2025 Jul 17;27(28):15222-15227. doi: 10.1039/d5cp02108a. PMID: 40613745.
Rotational Spectrum and Search for Lactonitrile toward Sgr B2(N)
The Astrophysical Journal 2025 feb 981 64. Doi: 10.3847/1538-4357/adad54
Genetic Analysis and Predictive Modeling of COVID-19 Severity in a Hospital-Based Patient Cohort
Biomolecules. 2025 Mar 10;15(3):393. doi: 10.3390/biom15030393. PMID: 40149929; PMCID: PMC11940120.
IFE.PTML: Advancing Neurotherapeutic Nanoparticle Release-System Design for Enhanced Brain Delivery
Mach. Learn.: Sci. Technol. 2025 6 035065. Doi: 10.1088/2632-2153/ae038a
Viroporins: discovery, methods of study, and mechanisms of host-membrane permeabilization
Review. Q Rev Biophys. 2025 Jan 14;58:e1. doi: 10.1017/S0033583524000192. PMID: 39806799.
Cognitive and Adaptive Functioning of CTNNB1 Syndrome Patients: A Comparison With Autism Spectrum Disorder and Cerebral Palsy
J Intellect Disabil Res. 2025 Jul;69(7):558-568. doi: 10.1111/jir.13235. Epub 2025 Mar 27. PMID: 40145647; PMCID: PMC12198099.
Karyopherins Remodel the Dynamic Organization of the Nuclear Pore Complex Transport Barrier
Nat Cell Biol. 2025 Dec;27(12):2089-2101. doi: 10.1038/s41556-025-01812-9. Epub 2025 Dec 2. PMID: 41331088; PMCID: PMC12717009.
Structural recognition and stabilization of tyrosine hydroxylase by the J-domain protein DNAJC12
Nat Commun. 2025 Mar 20;16(1):2755. doi: 10.1038/s41467-025-57733-6. PMID: 40113792; PMCID: PMC11926245.
Ceramide and the membrane-fusion activity of LC3/GABARAP autophagy proteins
Cell Mol Life Sci. 2025 Jul 19;82(1):283. doi: 10.1007/s00018-025-05811-9. PMID: 40682660.
Core-excited microsecond isomer in 207Pb
Physical Review C. American Physical Society (APS). 2025 Aug 1. doi: 10.1103/6l8p-cblc
Exploring the Anti-Chagas Activity of Zanthoxylum chiloperone's Seedlings Through Metabolomics and Protein-Ligand Docking
Plants (Basel). 2025 Mar 18;14(6):954. doi: 10.3390/plants14060954. PMID: 40265836; PMCID: PMC11946004.
Hierarchical Structural Organization in Bioinspired Peptide Coacervate Microdroplets
ACS Nano. 2025 Oct 14;19(40):35724-35739. doi: 10.1021/acsnano.5c12015. Epub 2025 Sep 30. PMID: 41025298.
Drug Release Nanoparticle Systems Design: Dataset Compilation and Machine Learning Modeling
ACS Applied Materials and Interfaces. Volume 17, Issue 3, Pages 5290 - 5306
A resurrected ancestor of Cas12a expands target access and substrate recognition for nucleic acid editing and detection
Nat Biotechnol. 2025 Oct;43(10):1663-1672. doi: 10.1038/s41587-024-02461-3. Epub 2024 Oct 31. PMID: 39482449.
Genotype-phenotype characterization and functional reconstitution of pathogenic β-catenin variants from CTNNB1 syndrome patients
PLoS Genet. 2025 Oct 13;21(10):e1011907. doi: 10.1371/journal.pgen.1011907. PMID: 41082542; PMCID: PMC12543288.
A new class of type VI secretion system effectors can carry two toxic domains and are recognized through the WHIX motif for export
PLoS Biol. 2025 Mar 17;23(3):e3003053. doi: 10.1371/journal.pbio.3003053. PMID: 40096082.