Publications
2024
Lipid Exchange of Apolipoprotein A-I Amyloidogenic Variants in Reconstituted High-Density Lipoprotein with Artificial Membranes.
Protein Sci. 2024 May;33(5):e4987. doi: 10.1002/pro.4987. PMID: 38607188; PMCID: PMC11010956.
Automatic mapping of aquaculture activity in the Atlantic Ocean
International Journal of Applied Earth Observation and Geoinformation,Volume 132,2024,104061.
Membrane Interaction Characteristics of the RTX Toxins and the Cholesterol-Dependence of Their Cytolytic/Cytotoxic Activity
Int J Mol Sci. 2024 Mar 8;25(6):3131. doi: 10.3390/ijms25063131. PMID: 38542105; PMCID: PMC10970614.
Understanding Aβ Peptide Binding toLipid Membranes. A BiophysicalPerspective
Int J Mol Sci. 2024 Jun 10;25(12):6401. doi: 10.3390/ijms25126401. PMID: 38928107; PMCID: PMC11203662.
NANO.PTML model for read-across prediction of nanosystems in neurosciences. computational model and experimental case of study
J Nanobiotechnology. 2024 Jul 23;22(1):435. doi: 10.1186/s12951-024-02660-9. PMID: 39044265; PMCID: PMC11267683.
Scenarios for the appearance of strange attractors in a model of three interacting microbubble contrast agents
Chaos, Solitons & Fractals, Volume 182, 2024, 114785, Doi: 10.1016/j.chaos.2024.114785
The unreasonable effectiveness of equilibrium gene regulation through the cell cycle
Cell Syst. 2024 Jul 17;15(7):639-648.e2. doi: 10.1016/j.cels.2024.06.002. Epub 2024 Jul 8. PMID: 38981487.
Mechanisms of recalcitrant fucoidan breakdown in marine Planctomycetota
Nat Commun. 2024 Dec 30;15(1):10906. doi: 10.1038/s41467-024-55268-w. PMID: 39738071; PMCID: PMC11685898.
From molecular mechanisms of prostate cancer to translational applications: based on multi-omics fusion analysis and intelligent medicine
Review. Health Inf Sci Syst. 2024.12(1):6. Doi: 10.1007/s13755-023-00264-5.
pH-Dependent Interactions of Coacervate Forming Histidine-rich Peptide with Model Lipid Membranes.
Front. Soft Matter, 19 January 2024 Sec. Biological Soft Matter Volume 3 - 2023 Doi: 10.3389/frsfm.2023.1339496
Proteomics profiling reveals lipid metabolism abnormalities during oogenesis in unexplained recurrent pregnancy loss
Front Immunol. 2024 Aug 8;15:1397633. doi: 10.3389/fimmu.2024.1397633. PMID: 39176081; PMCID: PMC11339622.
Extrusion-Based 3D Printing of Photocrosslinkable Chitosan Inks
Gels. 2024 Feb 4;10(2):126. doi: 10.3390/gels10020126. PMID: 38391456; PMCID: PMC10888165.
The molecular architecture of the nuclear basket
Cell 187, 1–15, September 19, 2024
Cryo-EM structure of Rev1-Polζ holocomplex reveals the mechanism of their cooperativity in translesion DNA synthesis
Nat Struct Mol Biol. 2024 May 8. doi: 10.1038/s41594-024-01302-w. Epub ahead of print. PMID: 38720088.
A deep learning method that identifies cellular heterogeneity using nanoscale nuclear features
Nat Mach Intell. 2024;6(9):1021-1033. doi: 10.1038/s42256-024-00883-x. Epub 2024 Aug 27. PMID: 39309215; PMCID: PMC11415298.
Sexual dimorphism on the acute effect of exercise in the morning vs. evening: A randomized crossover study
J Sport Health Sci. 2024 Dec 22:101021. doi: 10.1016/j.jshs.2024.101021. Epub ahead of print. PMID: 39716617.
2025
Determining the Molecular Shape of Progesterone: Insights from Laser Ablation Rotational Spectroscopy
J Phys Chem Lett. 2025 Feb 27:2425-2432. doi: 10.1021/acs.jpclett.4c03618. Epub ahead of print. PMID: 40013933.
Fabrication and Characterization of PEDOT:PSS-based Microstructured Electrodes for in vitro Cell Culture.
Advanced Materials Interfaces 2025 12;20. Doi: 10.1002/admi.202500097
Lipidome Plasticity Preserves Membrane Function in Sphingolipid-Depleted HAP1 Cells
FASEB J. 2025 Nov 30;39(22):e71238. doi: 10.1096/fj.202502545R. PMID: 41239795; PMCID: PMC12619050.
Enhancing Generalization and Mitigating Overfitting in Deep Learning for Brain Cancer Diagnosis from MRI
Appl Magn Reson 56, 359–394 (2025). https://doi.org/10.1007/s00723-024-01743-y
Adherent Cells Sustain Membrane Tension Gradients Independently of Migration
Nat Commun. 2025 Nov 26;16(1):10539. doi: 10.1038/s41467-025-65571-9. PMID: 41298393; PMCID: PMC12657936.
Stepwise hydration reveals conformational switching in chiral prolinol
J Am Chem Soc. 2025 Dec 24;147(51):47126-47137. doi: 10.1021/jacs.5c13582. Epub 2025 Dec 11. PMID: 41381997; PMCID: PMC12750993.
A mathematical model of CAR-T cell therapy in combination with chemotherapy for malignant gliomas
Chaos. 2025 Jun 1;35(6):063104. doi: 10.1063/5.0260252. PMID: 40455204.
Assessing porosity in cellulose nanofiber-based artificial plant cell walls as a function of salinity
Carbohydr Polym. 2025 Dec 15;370:124296. doi: 10.1016/j.carbpol.2025.124296. Epub 2025 Aug 26. PMID: 41116499.
The interaction of human serum components with model membranes containing phospholipids and lipopolysaccharides
J Colloid Interface Sci. 2025 Jun 15;688:150-160. doi: 10.1016/j.jcis.2025.02.131. Epub 2025 Feb 20. PMID: 39999488.
Reconstitution of DNMT1 complex with hemimethylated DNA, doubly monoubiquitinated PAF15, and PCNA for structural analysis
Int J Biol Macromol. 2025 Aug;319(Pt 2):145401. doi: 10.1016/j.ijbiomac.2025.145401. Epub 2025 Jun 19. PMID: 40543772.
Synthesis of Novel Amphiphilic Fluorinated Polymers for the Dispersion of Hydrophobic Gold Nanoparticles, Quantum Dots, or Highly Fluorinated Molecules in Water
ACS Nanosci Au. 2025 Sep 27;5(6):482-492. doi: 10.1021/acsnanoscienceau.5c00069. PMID: 41426009; PMCID: PMC12715620.
Neuroglia in neurodegeneration: Alzheimer, Parkinson, and Huntington disease
Review. Handb Clin Neurol. 2025;210:9-44. doi: 10.1016/B978-0-443-19102-2.00012-0. PMID: 40148060.
Chromatin compaction scaling with cell size follows a power law from interphase through mitosis
Biophys J. 2025 Nov 4;124(21):3678-3689. doi: 10.1016/j.bpj.2025.09.021. Epub 2025 Sep 18. PMID: 40968535.
Multivalent Interactions between Chaperone and Ribosome-Nascent Chain Complex Revealed by High-Speed AFM and MD Simulations
ACS Nano. 2025 Dec 23;19(50):42275-42287. doi: 10.1021/acsnano.5c13500. Epub 2025 Dec 11. PMID: 41380087; PMCID: PMC12752688.
AQUA Tox: A web tool for predicting aquatic toxicity in rotifer species using intrinsic explainable models
J Hazard Mater. 2025 Jul 15;492:138050. doi: 10.1016/j.jhazmat.2025.138050. Epub 2025 Mar 25. PMID: 40157185.
A binding site for the antibiotic GE81112 in the ribosomal mRNA channel
mBio. 2025 Nov 12;16(11):e0397824. doi: 10.1128/mbio.03978-24. Epub 2025 Oct 24. PMID: 41134047; PMCID: PMC12607687.
Electrophysiological dissection of the ion channel activity of the Pseudomonas aeruginosa ionophore protein toxin Tse5
Chem Phys Lipids. 2025 Mar;267:105472. doi: 10.1016/j.chemphyslip.2025.105472. Epub 2025 Jan 6. PMID: 39778700.
The Pseudomonas aeruginosa Tse4 toxin assembles ion-selective and voltage-sensitive ion channels to couple membrane depolarisation with K+ efflux
PLoS Pathog. 2025 Jun 4;21(6):e1012981. doi: 10.1371/journal.ppat.1012981. PMID: 40465776; PMCID: PMC12169545.
Recognizing past shapes: sex differentiation through deep learning on European Upper Palaeolithic hand stencils
Digital Applications in Archaeology and Cultural Heritage 2025 sep 38, e00453. Doi: 10.1016/j.daach.2025.e00453
Chaperone-Driven Entropic Separation of Amyloid Nanofilament Bundles
Phys. Rev. X. 2025; 15;011041
Structural Basis for Amyloid Fibril Assembly by the Master Cell-Signaling Regulator Receptor-Interacting Protein Kinase 1
Nat Commun. 2025 Oct 30;16(1):9607. doi: 10.1038/s41467-025-64621-6. PMID: 41168207; PMCID: PMC12575786.
Distinctive Membrane Accommodation Traits Underpinning the Neutralization Activity of HIV-1 Antibody against MPER
Mol Pharm. 2025 May 5;22(5):2494-2508. doi: 10.1021/acs.molpharmaceut.4c01341. Epub 2025 Apr 9. PMID: 40202993; PMCID: PMC12056697.
Adhirons are efficient tools to guide antiviral ligand Discovery
Commun Biol. 2025 Nov 26;8(1):1755. doi: 10.1038/s42003-025-09137-x. PMID: 41298844; PMCID: PMC12686443.
The interaction of human serum components with model membranes containing phospholipids and lipopolysaccharides
J Colloid Interface Sci. 2025 Jun 15;688:150-160. doi: 10.1016/j.jcis.2025.02.131. Epub 2025 Feb 20. PMID: 39999488.