Publications
2024
Tunneling and conformational preferences in racemic- and meso-2,4-pentanediol: A rotational spectroscopic and theoretical investigation.
J Chem Phys. 2024 Dec 28;161(24):244301. doi: 10.1063/5.0246313. PMID: 39714003.
Anti-miR-873-5p improves alcohol-related liver disease by enhancing hepatic deacetylation via SIRT1 disease
JHEP Rep. 2024. 6(1):100918. Doi: 10.1016/j.jhepr.2023.100918
Vesicle-vesicle fusion promoted by the ATG8 autophagy protein LC3C: relevance of the N-terminal region.
Autophagy. 2024 May 31:1-3. doi: 10.1080/15548627.2024.2359354. Epub ahead of print. PMID: 38818767.
Conformational adaptation and large amplitude motions of 1-phenyl-2,2,2-trifluoroethanol with two water molecules: a rotational spectroscopic and ab initio investigation
Phys Chem Chem Phys. 2024 Jul 3;26(26):18067-18075. doi: 10.1039/d4cp01516a. PMID: 38895791.
SUMOylation controls Hu antigen R posttranscriptional activity in liver cancer
Cell Rep. 2024 Mar 26;43(3):113924. doi: 10.1016/j.celrep.2024.113924. Epub 2024 Mar 18. PMID: 38507413.
Viroporin-like activity of the hairpin transmembrane domain of African swine fever virus B169L protein
J Virol. 2024 Aug 20;98(8):e0023124. doi: 10.1128/jvi.00231-24. Epub 2024 Jul 9. PMID: 38980063; PMCID: PMC11334534.
Integrability of Oscillators and Transcendental Invariant Curves
Qual. Theory Dyn. Syst. 24, 26 (2025). https://doi.org/10.1007/s12346-024-01182-x
On the antimicrobial properties and endurance of eugenol and 2-phenylphenol functionalized sol-gel coatings
Heliyon. 2024 Apr 3;10(8):e29146. doi: 10.1016/j.heliyon.2024.e29146. PMID: 38628759; PMCID: PMC11016974.
Multifunctional curcumin-based polymer coating: A promising platform against bacteria, inflammation and coagulation
Colloids Surf B Biointerfaces. 2024 Sep;241:114048. doi: 10.1016/j.colsurfb.2024.114048. Epub 2024 Jun 22. PMID: 38954936.
Fluorometric Measurement of Calmodulin-Dependent Peptide–Protein Interactions Using Dansylated Calmodulin
Bio Protoc. 2024 Apr 5;14(7):e4963. doi: 10.21769/BioProtoc.4963. PMID: 38618173; PMCID: PMC11006803.
Ceramide regulation of autophagy: A biophysical approach
Biochim Biophys Acta Mol Cell Biol Lipids . 2024 Mar;1869(2):159444
On the additive artificial intelligence-based discovery of nanoparticle neurodegenerative disease drug delivery systems
Beilstein J Nanotechnol. 2024 May 15;15:535-555. doi: 10.3762/bjnano.15.47. PMID: 38774585; PMCID: PMC11106676.
Morphological and Biophysical Study of S100A9 Protein Fibrils by Atomic Force Microscopy Imaging and Nanomechanical Analysis
Biomolecules. 2024 Aug 31;14(9):1091. doi: 10.3390/biom14091091. PMID: 39334857; PMCID: PMC11429797.
The Influence of Lipid Electric Charge on the Binding of Aβ(1-42) Amyloid Peptide to Bilayers in the Liquid-Ordered State
Biomolecules. 2024 Mar 1;14(3):298. doi: 10.3390/biom14030298. PMID: 38540718; PMCID: PMC10967883.
Automated fiducial-based alignment of cryo-electron tomography tilt series in Dynamo
Structure. 2024 Jul 22:S0969-2126(24)00241-7. doi: 10.1016/j.str.2024.07.003. Epub ahead of print. PMID: 39079528.
Nanoscale dynamics of Dynamin 1 helices reveals squeeze-twist deformation mode critical for membrane fission
Proc Natl Acad Sci U S A. 2024 Dec 3;121(49):e2321514121. doi: 10.1073/pnas.2321514121. Epub 2024 Nov 27. PMID: 39602273.
2025
Distinctive Membrane Accommodation Traits Underpinning the Neutralization Activity of HIV-1 Antibody against MPER
Mol Pharm. 2025 May 5;22(5):2494-2508. doi: 10.1021/acs.molpharmaceut.4c01341. Epub 2025 Apr 9. PMID: 40202993; PMCID: PMC12056697.
The interaction of human serum components with model membranes containing phospholipids and lipopolysaccharides
J Colloid Interface Sci. 2025 Jun 15;688:150-160. doi: 10.1016/j.jcis.2025.02.131. Epub 2025 Feb 20. PMID: 39999488.
Quasi-average predictions and regression to the trend: An application to the M6 financial forecasting competition
International Journal of Forecasting, 2025. doi: 10.1016/j.ijforecast.2024.12.006
A transient contractile seam promotes epithelial sealing and sequential assembly of body segments
Nat Commun. 2025 Apr 29;16(1):4010. doi: 10.1038/s41467-025-58566-z. PMID: 40301337; PMCID: PMC12041241.
Genetic Analysis and Predictive Modeling of COVID-19 Severity in a Hospital-Based Patient Cohort
Biomolecules. 2025 Mar 10;15(3):393. doi: 10.3390/biom15030393. PMID: 40149929; PMCID: PMC11940120.
Viroporins: discovery, methods of study, and mechanisms of host-membrane permeabilization
Review. Q Rev Biophys. 2025 Jan 14;58:e1. doi: 10.1017/S0033583524000192. PMID: 39806799.
Structural recognition and stabilization of tyrosine hydroxylase by the J-domain protein DNAJC12
Nat Commun. 2025 Mar 20;16(1):2755. doi: 10.1038/s41467-025-57733-6. PMID: 40113792; PMCID: PMC11926245.
Exploring the Anti-Chagas Activity of Zanthoxylum chiloperone's Seedlings Through Metabolomics and Protein-Ligand Docking
Plants (Basel). 2025 Mar 18;14(6):954. doi: 10.3390/plants14060954. PMID: 40265836; PMCID: PMC11946004.
Drug Release Nanoparticle Systems Design: Dataset Compilation and Machine Learning Modeling
ACS Applied Materials and Interfaces. Volume 17, Issue 3, Pages 5290 - 5306
A new class of type VI secretion system effectors can carry two toxic domains and are recognized through the WHIX motif for export
PLoS Biol. 2025 Mar 17;23(3):e3003053. doi: 10.1371/journal.pbio.3003053. PMID: 40096082.
First report on Quantitative Structure-Toxicity Relationship modeling approaches for predicting acute toxicity of organic chemicals against rotifer species
Sci Total Environ. 2025 May 15;977:179350. doi: 10.1016/j.scitotenv.2025.179350. Epub 2025 Apr 10. PMID: 40215635.
Artificial Intelligence-Driven Modeling for Hydrogel Three-Dimensional Printing: Computational and Experimental Cases of Study
Polymers (Basel). 2025 Jan 6;17(1):121. doi: 10.3390/polym17010121. PMID: 39795524; PMCID: PMC11723248.
Label-free metabolic fingerprinting of motile mammalian spermatozoa with subcellular resolution
BMC Biol. 2025 Mar 24;23(1):85. doi: 10.1186/s12915-025-02167-1. PMID: 40128804; PMCID: PMC11934609.
The integrity of the lipid bilayer structure is retained in natural occurring deep eutectic solvent water mixtures - a small angle X-ray scattering study
Phys Chem Chem Phys. 2025 May 14;27(19):10248-10258. doi: 10.1039/d5cp00331h. PMID: 40310971.
Selective cargo and membrane recognition by SNX17 regulates its interaction with Retriever
EMBO Rep. 2025 Jan;26(2):470-493. doi: 10.1038/s44319-024-00340-1. Epub 2024 Dec 9. PMID: 39653850; PMCID: PMC11772769.
Long-term memory in lipid assemblies: Rate-independent hysteresis in the ripple-to-liquid-disordered transition of sphingomyelin bilayers
J Chem Phys. 2025 Apr 7;162(13):135101. doi: 10.1063/5.0252051. PMID: 40167004.
Metabolic coordination and phase transitions in spatially distributed multi-cellular systems
Commun Phys 8, 205 (2025). https://doi.org/10.1038/s42005-025-02133-x
High power impulse magnetron sputtering deposited virucide and antibacterial CrN-Cu films and the durability of the antimicrobial activity
Heliyon. 2025 Jan 14;11(2):e41936. doi: 10.1016/j.heliyon.2025.e41936. PMID: 39897851; PMCID: PMC11787653.
Few-shot learning for non-vitrified ice segmentation
Sci Rep. 2025 Feb 14;15(1):5501. doi: 10.1038/s41598-025-86308-0. PMID: 39953118; PMCID: PMC11828963.
Actionable Forecasting as a Determinant of Biological Adaptation
Adv Sci (Weinh). 2025 Apr;12(16):e2413153. doi: 10.1002/advs.202413153. Epub 2025 Feb 27. PMID: 40017047; PMCID: PMC12021117.
Synchrotron-based correlative imaging of metals and proteins in neuronal cells: state of the art and future challenges in neurometallomics
Review. Metallomics. 2025 Feb 6;17(2):mfaf003. doi: 10.1093/mtomcs/mfaf003. PMID: 39890607.
Supramolecular chemistry in solution and solid–gas interfaces: Synthesis and Photophysical Properties of Monocolor and Bicolor Fluorescent Sensors for Barium Tagging in Neutrinoless Double Beta DecayDecay
RSC Appl. Interfaces, 2025. DOI 10.1039/D4LF00227J
Picrotoxin-Induced Epileptogenic Hippocampal Organotypic Slice Cultures (hOTCs)
Neural Stem Cells. Methods in Molecular Biology, vol 2899. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-4386-0_23.
Cryo-EM uncovers a sequential mechanism for RNA polymerase I pausing and stalling at abasic DNA lesions
Nat Commun. 2025 Jun 6;16(1):5254. doi: 10.1038/s41467-025-60536-4. PMID: 40480971; PMCID: PMC12144180.