Publications
2024
A deep learning method that identifies cellular heterogeneity using nanoscale nuclear features
Nat Mach Intell (2024). https://doi.org/10.1038/s42256-024-00883-x
ER-mitochondria distance is a critical parameter for efficient mitochondrial Ca2+ uptake and oxidative metabolism
Commun Biol. 2024 Oct 10;7(1):1294. doi: 10.1038/s42003-024-06933-9. PMID: 39390051; PMCID: PMC11467464.
APOE and familial hypercholesterolemia
Curr Opin Lipidol. 2024 Apr 17. doi: 10.1097/MOL.0000000000000937. Epub ahead of print. PMID: 38640077.
Limitations of human brain organoids to study neurodegenerative diseases: a manual to survive.
Front Cell Neurosci. 2024 Jul 9;18:1419526. doi: 10.3389/fncel.2024.1419526. PMID: 39049825; PMCID: PMC11267621.
Tunneling and conformational preferences in racemic- and meso-2,4-pentanediol: A rotational spectroscopic and theoretical investigation.
J Chem Phys. 2024 Dec 28;161(24):244301. doi: 10.1063/5.0246313. PMID: 39714003.
Anti-miR-873-5p improves alcohol-related liver disease by enhancing hepatic deacetylation via SIRT1 disease
JHEP Rep. 2024. 6(1):100918. Doi: 10.1016/j.jhepr.2023.100918
Vesicle-vesicle fusion promoted by the ATG8 autophagy protein LC3C: relevance of the N-terminal region.
Autophagy. 2024 May 31:1-3. doi: 10.1080/15548627.2024.2359354. Epub ahead of print. PMID: 38818767.
Conformational adaptation and large amplitude motions of 1-phenyl-2,2,2-trifluoroethanol with two water molecules: a rotational spectroscopic and ab initio investigation
Phys Chem Chem Phys. 2024 Jul 3;26(26):18067-18075. doi: 10.1039/d4cp01516a. PMID: 38895791.
SUMOylation controls Hu antigen R posttranscriptional activity in liver cancer
Cell Rep. 2024 Mar 26;43(3):113924. doi: 10.1016/j.celrep.2024.113924. Epub 2024 Mar 18. PMID: 38507413.
Viroporin-like activity of the hairpin transmembrane domain of African swine fever virus B169L protein
J Virol. 2024 Aug 20;98(8):e0023124. doi: 10.1128/jvi.00231-24. Epub 2024 Jul 9. PMID: 38980063; PMCID: PMC11334534.
Integrability of Oscillators and Transcendental Invariant Curves
Qual. Theory Dyn. Syst. 24, 26 (2025). https://doi.org/10.1007/s12346-024-01182-x
On the antimicrobial properties and endurance of eugenol and 2-phenylphenol functionalized sol-gel coatings
Heliyon. 2024 Apr 3;10(8):e29146. doi: 10.1016/j.heliyon.2024.e29146. PMID: 38628759; PMCID: PMC11016974.
Multifunctional curcumin-based polymer coating: A promising platform against bacteria, inflammation and coagulation
Colloids Surf B Biointerfaces. 2024 Sep;241:114048. doi: 10.1016/j.colsurfb.2024.114048. Epub 2024 Jun 22. PMID: 38954936.
Fluorometric Measurement of Calmodulin-Dependent Peptide–Protein Interactions Using Dansylated Calmodulin
Bio Protoc. 2024 Apr 5;14(7):e4963. doi: 10.21769/BioProtoc.4963. PMID: 38618173; PMCID: PMC11006803.
Ceramide regulation of autophagy: A biophysical approach
Biochim Biophys Acta Mol Cell Biol Lipids . 2024 Mar;1869(2):159444
On the additive artificial intelligence-based discovery of nanoparticle neurodegenerative disease drug delivery systems
Beilstein J Nanotechnol. 2024 May 15;15:535-555. doi: 10.3762/bjnano.15.47. PMID: 38774585; PMCID: PMC11106676.
Morphological and Biophysical Study of S100A9 Protein Fibrils by Atomic Force Microscopy Imaging and Nanomechanical Analysis
Biomolecules. 2024 Aug 31;14(9):1091. doi: 10.3390/biom14091091. PMID: 39334857; PMCID: PMC11429797.
The Influence of Lipid Electric Charge on the Binding of Aβ(1-42) Amyloid Peptide to Bilayers in the Liquid-Ordered State
Biomolecules. 2024 Mar 1;14(3):298. doi: 10.3390/biom14030298. PMID: 38540718; PMCID: PMC10967883.
Automated fiducial-based alignment of cryo-electron tomography tilt series in Dynamo
Structure. 2024 Jul 22:S0969-2126(24)00241-7. doi: 10.1016/j.str.2024.07.003. Epub ahead of print. PMID: 39079528.
Nanoscale dynamics of Dynamin 1 helices reveals squeeze-twist deformation mode critical for membrane fission
Proc Natl Acad Sci U S A. 2024 Dec 3;121(49):e2321514121. doi: 10.1073/pnas.2321514121. Epub 2024 Nov 27. PMID: 39602273.
Unlocking a new hydrogen-bonding marker: C-O bond shortening in vicinal diols revealed by rotational spectroscopy
J Chem Phys. 2024 Apr 21;160(15):154304. doi: 10.1063/5.0203123. PMID: 38624119.
EMhub: a web platform for data management and on-the-fly processing in scientific facilities
Acta Crystallogr D Struct Biol. 2024 Nov 1. doi: 10.1107/S2059798324009471. Epub ahead of print. PMID: 39373194.
Mechanism for Vipp1 spiral formation, ring biogenesis and membrane repair
Nat Struct Mol Biol. 2025 Mar;32(3):571-584. doi: 10.1038/s41594-024-01401-8. Epub 2024 Nov 11. PMID: 39528797; PMCID: PMC11919738.
Fluorescence microscopy shadow imaging for neuroscience
Front Cell Neurosci. 2024 Feb 15;18:1330100. doi: 10.3389/fncel.2024.1330100. PMID: 38425431; PMCID: PMC10902105.
Computational method for designing vaccines applied to virus-like particles (VLPs) as epitope carriers
Vaccine. 2024 Jul 11;42(18):3916-3929. doi: 10.1016/j.vaccine.2024.05.025. Epub 2024 May 22. PMID: 38782665.
Generation of a Nonbilayer Lipid Nanoenvironment after Epitope Binding Potentiates Neutralizing HIV-1 MPER Antibody
ACS Appl Mater Interfaces. 2024 Oct 24. doi: 10.1021/acsami.4c13353. Epub ahead of print. PMID: 39446590.
Warfarin-A natural anticoagulant: A review of research trends for precision medication
Phytomedicine. 2024 Feb 23;128:155479. doi: 10.1016/j.phymed.2024.155479. Epub ahead of print. PMID: 38493714.
(1-Deoxy)ceramides in bilayers containing sphingomyelin and cholesterol
Colloids Surf B Biointerfaces. 2024 Aug 8;243:114155. doi: 10.1016/j.colsurfb.2024.114155. Epub ahead of print. PMID: 39137529.
The Effect of Hyperconjugation and Hydrogen Bonding on the Conformers of Methylated Monosaccharides
Chemistry. 2024 Sep 23:e202403166. doi: 10.1002/chem.202403166. Epub ahead of print. PMID: 39312624.
Architecture, Function, Regulation, and Evolution of α-Glucans Metabolic Enzymes in Prokaryotes
REVIEW. Chem Rev. 2024 Apr 24;124(8):4863-4934. doi: 10.1021/acs.chemrev.3c00811. Epub 2024 Apr 12. PMID: 38606812; PMCID: PMC11046441.
Fission of Double-Membrane Tubes under Tension
Biophys J. 2024 Oct 14:S0006-3495(24)00681-7. doi: 10.1016/j.bpj.2024.10.009. Epub ahead of print. PMID: 39410713.
Machine learning guided prediction of warfarin blood levels for personalized medicine based on clinical longitudinal data from cardiac surgery patients: a prospective observational study
Int J Surg. 2024 Oct 1;110(10):6528-6540. doi: 10.1097/JS9.0000000000001734. PMID: 38833337; PMCID: PMC11487003.
The N-terminal region of the ATG8 autophagy protein LC3C is essential for its membrane fusion properties
Int J Biol Macromol. 2024 Feb 1;262(Pt 1):129835. doi: 10.1016/j.ijbiomac.2024.129835. Epub ahead of print. PMID: 38302024.
Interplay between hippocampal TACR3 and systemic testosterone in regulating anxiety-associated synaptic plasticity.
Mol Psychiatry. 2024 Mar;29(3):686-703. doi: 10.1038/s41380-023-02361-z. Epub 2023 Dec 22. PMID: 38135756; PMCID: PMC11153148.
A resurrected ancestor of Cas12a expands target access and substrate recognition for nucleic-acid editing and detection
Nat Biotechnol. 2024 Oct 31. doi: 10.1038/s41587-024-02461-3. Epub ahead of print. PMID: 39482449.
MLe-KCNQ2: An Artificial Intelligence Model for the Prognosis of Missense KCNQ2 Gene Variants
Int J Mol Sci. 2024 Mar 2;25(5):2910. doi: 10.3390/ijms25052910. PMID: 38474157; PMCID: PMC10932340.
Structural and biochemical characterization of the C-terminal region of the human RTEL1 helicase
Protein Sci. 2024 Sep;33(9):e5093. doi: 10.1002/pro.5093. PMID: 39180489.
Editorial: Human brain organoids to model neurodegenerative diseases at the BOSS23 Brain Organoid Summer School
Editorial. Front Cell Neurosci. 2024 Nov 5;18:1501036. doi: 10.3389/fncel.2024.1501036. PMID: 39564190; PMCID: PMC11573503.
Interfacial Stresses on Droplet Interface Bilayers Using Two Photon Fluorescence Lifetime Imaging Microscopy
J Colloid Interface Sci. 2024 Jan;653(Pt B):1196-1204. Doi: 10.1016/j.jcis.2023.09.092.
Structural effects of oxidation on sugars: glucose as a precursor of gluconolactone and glucuronolactone
Chem Commun (Camb). 2024 Apr 25. doi: 10.1039/d4cc00735b. Epub ahead of print. PMID: 38661549.