Publications
2022
Plasma membrane effects of sphingolipid-synthesis inhibition by myriocin in CHO cells: a biophysical and lipidomic study
Sci Rep 12, 955 (2022) doi: 10.1038/s41598-021-04648-z
Bond Length Alternation and Internal Dynamics in Model Aromatic Substituents of Lignin
ChemPhysChem. 23 (6) e202100808 (2022) doi:10.1002/cphc.202100808
Liquid-crystalline, liquid-ordered, rippled and gel lipid bilayer phases as observed with nile red fluorescence
Journal of Molecular Liquids (2022)
Volume 363, 119874, doi.org/10.1016/j.molliq.2022.119874Rotational Spectroscopy of 2-Furoic Acid and Its Dimer: Conformational Distribution and Double Proton Tunneling
ChemPhysChem (2022), doi.org/10.1002/cphc.202200176
Robustness of DNA looping across multiple cell divisions in individual bacteria
National Academy of Sciences (2022), 119 (33) e2200061119; doi: 10.1073/pnas.2200061119
Boosting Cholesterol Efflux from Foam Cells by Sequential Administration of rHDL to Deliver MicroRNA and to Remove Cholesterol in a Triple-Cell Two-Dimensional Atherosclerosis Model
Small. Accepted Author Manuscript, (2022) doi: 10.1039/d1en00967b
Chapter 6 - Cholesterol and ceramide: an unlikely pairCholesterol and ceramide: an unlikely pair
Cholesterol, From Chemistry and Biophysics to the Clinic (2022), Pages 111-126, doi.org/10.1016/B978-0-323-85857-1.00017-1
Four Cholesterol-Recognition Motifs in the Pore-Forming and Translocation Domains of Adenylate Cyclase Toxin Are Essential for Invasion of Eukaryotic Cells and Lysis of Erythrocytes. International journal of molecular sciences, 2022, 23(15)
doi.org/10.3390/ijms23158703
ScipionTomo: Towards cryo-electron tomography software integration, reproducibility, and validation
Journal of Structural Biology (2022), doi.org/10.1016/j.jsb.2022.107872
Reply to Roy and Pucadyil: A gain of function by a GTPase-impaired Drp1
PNAS (2022), doi.org/10.1073/pnas.2202391119
Thermal effects of plumage coloration
Review article, Ibis (2022), doi: 10.1111/ibi.13100
Cryo-EM structure of translesion DNA synthesis polymerase ζ with a base pair mismatch
Nature Communications,13, 1050 (2022) doi: 10.1038/s41467-022-28644-7
Quantitative super-resolution imaging of pathological aggregates reveals distinct toxicity profiles in different synucleinopathies
Proceedings of the National Academy of Sciences of the United States of America (2022) doi/10.1073/pnas.2205591119
Stable Deep Neural Network Architectures for Mitochondria Segmentation on Electron Microscopy Volumes
Neuroinformatics. 2022 Apr;20(2):437-450. doi: 10.1007/s12021-021-09556-1.
Machine Learning Study of Metabolic Networks vs ChEMBL Data of Antibacterial Compounds
Molecular Pharmaceutics (2022), DOI: 10.1021/acs.molpharmaceut.2c00029
Conformational rearrangements regulating the DNA repair protein APE1
Int. J. Mol. Sci. (2022), 23(14), 8015; doi.org/10.3390/ijms23148015
Diffusion and interaction dynamics of the cytosolic peroxisomal import receptor PEX5
Biophysical Reports (2022), doi:10.1016/j.bpr.2022.100055
Role of Protein–Lipid Interactions in Viral Entry
Review, Adv Biol (Weinh). 6(3):e2101264 (2022) doi: 10.1002/adbi.202101264.
Shaping the heart with mechanosensitive shrinking cells
Developmental Cell (2022), doi.org/10.1016/j.devcel.2022.02.016
Deep learning based domain adaptation for mitochondria segmentation on EM volumes
Comput Methods Programs Biomed. 2022 Jul;222:106949. doi: 10.1016/j.cmpb.2022.106949
Lipoprotein(a) in heterozygous familial hypercholesterolemia. Influence of the causative gene and type of mutation
Atherosclerosis (2022), DOI: 10.1016/j.atherosclerosis.2021.08.009
The enigma of phosphoinositides and their derivatives: Their role in regulation of subcellular compartment morphology
BBA - Biomembranes 1864 (2022) 183780, (2022) doi: 10.1016/j.bbamem.2021.183780
Engineering pan–HIV-1 neutralization potency through multispecific antibody avidity
PNAS (2022), doi.org/10.1073/pnas.2112887119
The Myth of the Annular Lipids
Review, Biomedicines (2022), 10(11):2672, doi: 10.3390/biomedicines10112672
First observation of a brood patch on a male sunbird (Chalcomitra amethystina)
J Ornithol (2022). https://doi.org/10.1007/s10336-022-01964-7
The fusion of quantitative molecular proteomics and immune-oncology: a step towards precision medicine in cancer therapeutics
Review, Federation of European Biochemical Societies letters (2022), doi: 10.1002/1873-3468.14480
A quantitative biophysical principle to explain the 3D cellular connectivity in curved epithelia
Cell Syst. 2022 Aug 17;13(8):631-643.e8. doi: 10.1016/j.cels.2022.06.003.
A gain-of-function by a GTPase-impaired Drp1
Biophysics and Computational Biology (2022), 119 (27) e2202391119, doi.org/10.1073/pnas.2202391119
Rotation-tunneling spectra and barriers of isotopologues of 2,2,2-trifluoroethanol and 2,2,3,3,3-pentafluoropropanol
Journal of Molecular Spectroscopy (2022), doi: 10.1016/j.jms.2022.111687
Epidemic oscillations induced by social network control
J. Stat. Mech. (2022) 013404, doi.org/10.1088/1742-5468/ac4804
Molecular Shape Solution for Mesoscopic Remodeling of Cellular Membranes
Review, Annual review of biophysics (2022), doi: 10.1146/annurev-biophys-011422-100054
Erythrocyte Membrane Nanomechanical Rigidity Is Decreased in Obese Patients
Int. J. Mol. Sci. 23(3), 1920 (2022). https://doi.org/10.3390/ijms23031920
Microglia-Mediated Inflammation and Neural Stem Cell Differentiation in Alzheimer's Disease: Possible Therapeutic Role of KV1.3 Channel Blockade
Frontiers in cellular neuroscience (2022), doi: 10.3389/fncel.2022.868842
Brain virtual histology with X-ray phase-contrast tomography Part II:3D morphologies of amyloid- β plaques in Alzheimer's disease models
Biomed Opt Express. 2022 Feb 23;13(3):1640-1653. doi: 10.1364/BOE.438890
Four Cholesterol-Recognition Motifs in the Pore-Forming and Translocation Domains of Adenylate Cyclase Toxin Are Essential for Invasion of Eukaryotic Cells and Lysis of Erythrocytes
Int. J. Mol. Sci. (2022), 23(15), 8703; doi.org/10.3390/ijms23158703
Prediction of acute toxicity of pesticides for Americamysis bahia using linear and nonlinear QSTR modelling approaches
Environmental Research (2022), doi: 10.1016/j.envres.2022.113984
Comprehensive structure and functional adaptations of the yeast nuclear pore complex
Cell (2022), Volume 185, Issue 2, P361-378.E25, doi.org/10.1016/j.cell.2021.12.015
Autophagy protein LC3C binding to phospholipid and interaction with lipid membranes
International Journal of Biological Macromolecules (2022), doi: 10.1016/j.ijbiomac.2022.05.129
Exploring the Influence of Intermolecular Interactions in Prebiotic Chemistry Using Laser Spectroscopy and Calculations
Chem.Eur. J. 28 (1), e202103636 (2022) doi: 10.1002/chem.202103636
Functional Delineation of a Protein-Membrane Interaction Hotspot Site on the HIV-1 Neutralizing Antibody 10E8
Int J Mol Sci (2022); 23(18):10767. doi: 10.3390/ijms231810767