Publications
2021
- Palladium-mediated Synthesis and Biological Evaluation of C-10b substituted Dihydropyrrolo[1,2-b]isoquinolines as Antileishmanial Agents.- European Journal of Medicinal Chemistry 220 (2021) 113458, (2021) doi: 10.1016/j.ejmech.2021.113458 
- Pulmonary surfactant and drug delivery: Vehiculization, release and targeting of surfactant/tacrolimus formulations- Journal of Controlled Release 329, 205–222 (2021) doi: 10.1016/j.jconrel.2020.11.042 
- Identification of Tse8 as a Type VI secretion system toxin from Pseudomonas aeruginosa that targets the bacterial transamidosome to inhibit protein synthesis in prey cells.- Nat Microbiol 6, 1199–1210 (2021) doi: 10.1038/s41564-021-00950-8 
- Focal accumulation of aromaticity at the CDRH3 loop mitigates 4E10 polyreactivity without altering its HIV neutralization profile.- iScience 24, 102987, (2021) doi: 10.1016/j.isci.2021.102987 
- Molecular and mesoscopic geometries in autophagosome generation. A review- BBA - Biomembranes 1863 (2021) 183731, (2021) doi: 10.1016/j.bbamem.2021.183731 
- Virion structure and in vitro genome release mechanism of dicistrovirus Kashmir bee virus- J Virol 95:e01950-20, (2021) doi: 10.1128/JVI.01950-20 
- Super-Resolution Microscopy Using a Bioorthogonal-Based Cholesterol Probe Provides Unprecedented Capabilities for Imaging Nanoscale Lipid Heterogeneity in Living Cells.- Small Methods, 5, 2100430, (2021) doi: 10.1002/smtd.202100430 
- Truncation-Driven Lateral Association of α-Synuclein Hinders Amyloid Clearance by the Hsp70-based Disaggregase.- Int. J. Mol. Sci. 2021, 22(23), 12983; (2021) doi: 10.3390/ijms222312983 
- Molecular mechanisms of lipotoxicity-induced pancreatic β-cell dysfunction- International Review of Cell and Molecular Biology, Academic Press, Volume 359, 2021, 357-402, (2021) doi: 10.1016/bs.ircmb.2021.02.013 
- Phase-selective staining of model and cell membranes, lipid droplets and lipoproteins with fluorescent solvatochromic pyrene probes- Biochim Biophys Acta Biomembr. 1863(1):183470. (2021) doi: 10.1016/j.bbamem.2020.183470. (2021) 
- Multivalency transforms SARS-CoV-2 antibodies into ultrapotent neutralizers.- Nat Commun 12, 3661 (2021) doi: 10.1038/s41467-021-23825-2 
- Rotational spectroscopic study and astronomical search for propiolamide in Sgr B2(N).- A&A 647, A55 (2021) doi: 10.1051/0004-6361/202040211 
- Nonlinear material and ionic transport through membrane nanotubes- BBA - Biomembranes 1863 (2021) 183677, (2021) doi: 10.1016/j.bbamem.2021.183677 
- Towards Machine Learning Discovery of Dual Antibacterial Drug-Nanoparticle Systems.- Nanoscale, 2021,13, 17854-17870, (2021) doi: 10.1039/D1NR04178A 
- Editorial: New Experimental and Computational Tools for Drug Discovery: Part - XI- Current Topics in Medicinal Chemistry, 21, 7, 597 - 598, (2021) doi: 10.2174/156802662107210312114854 
- Do calmodulin binding IQ motifs have built-in capping domains?- Protein Science, 30: 2029– 2041, (2021) doi: 10.1002/pro.4170 
- In Vitro Cellular Uptake Studies of Self-Assembled Fluorinated Nanoparticles Labelled with Antibodies.- Nanomaterials 2021, 11(8), 1906; (2021) doi: 10.3390/nano11081906 
- Mitochondrial membrane tension governs fission- Cell Reports 35, 108947, April 13, (2021) doi: 10.1016/j.celrep.2021.108947 
- Quantification of biomarker functionality predicts patient outcomes.- Br J Cancer 124, 1618–1620 (2021) doi: 10.1038/s41416-021-01291-3 
- Lyophilized, Thermostable Spike or RBD Immunogenic Liposomes Induce Protective Immunity Against SARS-CoV-2 in Mice.- Sci. Adv. 7, eabj1476, (2021) doi: 10.1126/sciadv.abj1476 
- Bacteriophage PRD1 as a nanoscaffold for drug loading- Nanoscale, 2021,13, 19875-19883, (2021) doi: 10.1039/D1NR04153C 
- (r)HDL in theranostics: how do we apply HDL's biology for precision medicine in atherosclerosis management?- Biomater. Sci., 2021,9, 3185-3208, (2021) doi: 10.1039/D0BM01838D 
- Predicting Metabolic Reaction Networks with Perturbation-Theory Machine Learning (PTML) Models- Current Topics in Medicinal Chemistry, 21, 9, 819-827, (2021) doi: 10.2174/1568026621666210331161144 
- Molecular ruler mechanism and interfacial catalysis of the integral membrane acyltransferase PatA.- Sci Adv. 2021 Oct 15;7(42):eabj4565. doi: 10.1126/sciadv.abj4565.. PMID: 34652941 
- Cholesterol stimulates the lytic activity of Adenylate Cyclase Toxin on lipid membranes by promoting toxin oligomerization and formation of pores with a greater effective size.- The FASEB Journal, 35:e21657, (2021) doi: 10.1096/fj.202001879RR 
- VLP-Based Vaccines as a Suitable Technology to Target Trypanosomatid Diseases.- Vaccines 2021, 9(3), 220; (2021) doi: 10.3390/vaccines9030220 
- Single-aminoacid discrimination in proteins with homogeneous nanopore sensors and neural networks- Biosensors and Bioelectronics, 180, 2021,113108, (2021) doi: 10.1016/j.bios.2021.113108 
- FORTIS: a live-cell assay to monitor AMPA receptors using pH-sensitive fluorescence tags.- Transl Psychiatry 11, 324 (2021) doi:10.1038/s41398-021-01457-w 
- Dimeric Rhodopsin R135L mutant-transducin complex sheds light on misfunctions leading to Retinitis pigmentosa.- J. Phys. Chem. B 2021, 125, 47, 12958–12971, (2021) doi: 10.1021/acs.jpcb.1c06348 
- NMR identification of a conserved Drp1 cardiolipin-binding motif essential for stress- induced mitochondrial fission.- Proceedings of the National Academy of Sciences Jul 2021, 118 (29) e2023079118, (2021) doi: 10.1073/pnas.2023079118 
- Structure of HIV-1 gp41 with its membrane anchors targeted by neutralizing antibodies- eLife 2021;10:e65005, (2021) doi: 10.7554/eLife.65005 
- CHO/LY-B cell growth under limiting sphingolipid supply: Correlation between lipid composition and biophysical properties of sphingolipid-restricted cell membranes.- The FASEB Journal, 35:e21657 (2021) doi: 10.1096/fj.202001879RR 
- Prediction of Anti-Glioblastoma Drug-Decorated Nanoparticle Delivery Systems Using Molecular Descriptors and Machine Learning.- Int. J. Mol. Sci. 2021, 22(21), 11519; (2021) doi: 10.3390/ijms222111519 
- Immunogenomics of Colorectal Cancer Response to Checkpoint Blockade: Analysis of the KEYNOTE 177 Trial and Validation Cohorts- Gastroenterology 2021;161:1179–1193, (2021) doi: 10.1053/j.gastro.2021.06.064 
- Conformational plasticity underlies membrane fusion induced by an HIV sequence juxtaposed to the lipid envelope.- Sci Rep 11, 1278 (2021) doi: 10.1038/s41598-020-80156-w 
- Synthesis, Pharmacological, and Biological Evaluation of 2-Furoyl-Based MIF-1 Peptidomimetics and the Development of a General-Purpose Model for Allosteric Modulators (ALLOPTML)- ACS Chem. Neurosci. 2021, 12, 1, 203–215, (2021) doi: 10.1021/acschemneuro.0c00687 
- All-or-none amyloid disassembly via chaperone-triggered fibril unzipping favors clearance of α-synuclein toxic species.- Proceedings of the National Academy of Sciences Sep 2021, 118 (36) e2105548118, (2021) doi: 10.1073/pnas.2105548118 
- MLb-LDLr: A Machine Learning Model for Predicting the Pathogenicity of LDL receptor Missense Variants- Atherosclerosis 331 (2021) e3, (2021) doi: 10.1016/j.atherosclerosis.2021.06.013 
- Minimal metabolism: a key concept to investigate the origins and nature of biological systems.- BioEssays, 43, e2100103, (2021) doi: 10.1002/bies.202100103 
- A Systematic Approach to Assess the Activity and Classification of PCSK9 Variants.- Int. J. Mol. Sci. 2021, 22(24), 13602; (2021) doi: 10.3390/ijms222413602