2025

• Genotype-phenotype characterization and functional reconstitution of pathogenic β-catenin variants from CTNNB1 syndrome patients

  PLoS Genet. 2025 Oct 13;21(10):e1011907. doi: 10.1371/journal.pgen.1011907. PMID: 41082542; PMCID: PMC12543288.

• A new class of type VI secretion system effectors can carry two toxic domains and are recognized through the WHIX motif for export

  PLoS Biol. 2025 Mar 17;23(3):e3003053. doi: 10.1371/journal.pbio.3003053. PMID: 40096082.

• Geometry-aware template matching for cryo-electron tomograms in Dynamo

  Structure. 2025 Sep 4;33(9):1591-1602.e3. doi: 10.1016/j.str.2025.06.009. Epub 2025 Jul 17. PMID: 40680749.

• Machine Learning Approach for Predicting Drug-Like Molecules Targeting Calmodulin Pathway Proteins

  J Chem Inf Model. 2025 Nov 10;65(21):11892-11907. doi: 10.1021/acs.jcim.5c02111. Epub 2025 Oct 22. PMID: 41125631; PMCID: PMC12606648.

• First report on Quantitative Structure-Toxicity Relationship modeling approaches for predicting acute toxicity of organic chemicals against rotifer species

  Sci Total Environ. 2025 May 15;977:179350. doi: 10.1016/j.scitotenv.2025.179350. Epub 2025 Apr 10. PMID: 40215635.
  

• The critical roles of bioactive sphingolipids in inflammation

  J Biol Chem. 2025 Aug;301(8):110475. doi: 10.1016/j.jbc.2025.110475. Epub 2025 Jul 11. PMID: 40653199; PMCID: PMC12340401.

• Artificial Intelligence-Driven Modeling for Hydrogel Three-Dimensional Printing: Computational and Experimental Cases of Study

  Polymers (Basel). 2025 Jan 6;17(1):121. doi: 10.3390/polym17010121. PMID: 39795524; PMCID: PMC11723248.

• BiaPy: accessible deep learning on bioimages

  Nat Methods 22, 1124–1126 (2025). https://doi.org/10.1038/s41592-025-02699-y

• Engineering a single-chain immunoglobulin scaffold loaded with a latent-releasable cytotoxic pore-forming peptide

  Commun Biol. 2025 Nov 25;8(1):1665. doi: 10.1038/s42003-025-09066-9. PMID: 41291002; PMCID: PMC12647727.

• Label-free metabolic fingerprinting of motile mammalian spermatozoa with subcellular resolution

  BMC Biol. 2025 Mar 24;23(1):85. doi: 10.1186/s12915-025-02167-1. PMID: 40128804; PMCID: PMC11934609.

• The puzzle of sphingolipids and cholesterol under the atomic force microscope: bilayer thicknesses and breakthrough forces

  Chem Phys Lipids. 2025 Sep;271:105527. doi: 10.1016/j.chemphyslip.2025.105527. Epub 2025 Jul 15. PMID: 40675432.

• Nanoscale Analysis beyond Imaging by Atomic Force Microscopy: Molecular Perspectives on Oncology and Neurodegeneration

  Small Sci. 2025 Oct 12;5(11):2500351. doi: 10.1002/smsc.202500351. PMID: 41256193; PMCID: PMC12622512.

• The integrity of the lipid bilayer structure is retained in natural occurring deep eutectic solvent water mixtures - a small angle X-ray scattering study

  Phys Chem Chem Phys. 2025 May 14;27(19):10248-10258. doi: 10.1039/d5cp00331h. PMID: 40310971.

• The role of artificial intelligence in implant dentistry: a systematic review

  Int J Oral Maxillofac Surg. 2025 May 28:S0901-5027(25)00118-3. doi: 10.1016/j.ijom.2025.04.005. Epub ahead of print. PMID: 40436717.

• Selective cargo and membrane recognition by SNX17 regulates its interaction with Retriever

  EMBO Rep. 2025 Jan;26(2):470-493. doi: 10.1038/s44319-024-00340-1. Epub 2024 Dec 9. PMID: 39653850; PMCID: PMC11772769.

• Quantum Tunneling Fingerprints of Chirality-Induced Symmetry Preferences in Methyl Lactate Dimer

  J Am Chem Soc. 2025 May 21;147(20):17002-17009. doi: 10.1021/jacs.5c01184. Epub 2025 Apr 16. PMID: 40237444.

• Engineering plasma membrane mimics: general discussion

  Faraday Discuss. 2025 Aug 13;259(0):182-199. doi: 10.1039/d5fd90019k. PMID: 40748046.

• Long-term memory in lipid assemblies: Rate-independent hysteresis in the ripple-to-liquid-disordered transition of sphingomyelin bilayers

  J Chem Phys. 2025 Apr 7;162(13):135101. doi: 10.1063/5.0252051. PMID: 40167004.

• Substrate stiffness and pressure alter retinal Müller glia response and extracellular matrix production

  Biomater Biosyst. 2025 Jul 7;19:100114. doi: 10.1016/j.bbiosy.2025.100114. PMID: 40687493; PMCID: PMC12275231.

• Evolution of Hydrogen-Bonding Networks in Glycerol Dimer and Trimer: How Close Are They to Water Clusters?

  J Am Chem Soc. 2025 Nov 26;147(47):43350-43357. doi: 10.1021/jacs.5c09108. Epub 2025 Nov 14. PMID: 41234137

• Metabolic coordination and phase transitions in spatially distributed multi-cellular systems

  Commun Phys 8, 205 (2025). https://doi.org/10.1038/s42005-025-02133-x
  

• Lentiviral Vectors: From Wild-Type Viruses to Efficient Multi-Functional Delivery Vectors

  Int J Mol Sci. 2025 Sep 1;26(17):8497. doi: 10.3390/ijms26178497. PMID: 40943418; PMCID: PMC12429303.

• High power impulse magnetron sputtering deposited virucide and antibacterial CrN-Cu films and the durability of the antimicrobial activity

  Heliyon. 2025 Jan 14;11(2):e41936. doi: 10.1016/j.heliyon.2025.e41936. PMID: 39897851; PMCID: PMC11787653.

• IFPTML Multi-output Modelling for Anti-Retroviral Compounds Including Drug Structure and Target Protein Sequences Information

  J Chem Inf Model. 2025 May 12;65(9):4353-4366. doi: 10.1021/acs.jcim.5c00242. Epub 2025 Apr 28. PMID: 40293160.

• Structure and dynamics of asymmetric membranes: general discussion

  Faraday Discuss. 2025 Aug 13;259(0):475-544. doi: 10.1039/d5fd90020d. PMID: 40748040.

• Few-shot learning for non-vitrified ice segmentation

  Sci Rep. 2025 Feb 14;15(1):5501. doi: 10.1038/s41598-025-86308-0. PMID: 39953118; PMCID: PMC11828963.
  

• Cross-feeding percolation phase transitions of intercellular metabolic networks

  Sci Adv. 2025 Sep 5;11(36):eadv8216. doi: 10.1126/sciadv.adv8216. Epub 2025 Sep 3. PMID: 40901938; PMCID: PMC12407054.

• PortGISANS: Nested Mirror Optics For a Portable GISANS Adapter

  Sci Rep. 2025 Nov 21;15(1):41184. doi: 10.1038/s41598-025-28836-3. PMID: 41272196; PMCID: PMC12638956.

• Actionable Forecasting as a Determinant of Biological Adaptation

  Adv Sci (Weinh). 2025 Apr;12(16):e2413153. doi: 10.1002/advs.202413153. Epub 2025 Feb 27. PMID: 40017047; PMCID: PMC12021117.

• Role of Ceramide Kinase/C1P in the Regulation of Cell Growth and Survival

  Int J Mol Sci. 2025 Aug 28;26(17):8374. doi: 10.3390/ijms26178374. PMID: 40943293; PMCID: PMC12429069.

• Synchrotron-based correlative imaging of metals and proteins in neuronal cells: state of the art and future challenges in neurometallomics

  Review. Metallomics. 2025 Feb 6;17(2):mfaf003. doi: 10.1093/mtomcs/mfaf003. PMID: 39890607.

• Bioinspired lipid coated porous particle as inhalable carrier with pulmonary surfactant adhesion and mucus penetration

  J Colloid Interface Sci. 2025 Nov;697:137967. doi: 10.1016/j.jcis.2025.137967. Epub 2025 May 22. PMID: 40449392.

• Concluding (closing?) remarks

  Faraday Discuss. 2025 Aug 13;259(0):634-643. doi: 10.1039/d5fd00091b. PMID: 40667614.

• Supramolecular chemistry in solution and solid–gas interfaces: Synthesis and Photophysical Properties of Monocolor and Bicolor Fluorescent Sensors for Barium Tagging in Neutrinoless Double Beta DecayDecay

  RSC Appl. Interfaces, 2025. DOI 10.1039/D4LF00227J

• Picrotoxin-Induced Epileptogenic Hippocampal Organotypic Slice Cultures (hOTCs)

  Neural Stem Cells. Methods in Molecular Biology, vol 2899. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-4386-0_23.

• Structure-guided engineering of type I-F CASTs for targeted gene insertion in human cells

  Nat Commun. 2025 Aug 23;16(1):7891. doi: 10.1038/s41467-025-63164-0. PMID: 40849322.

• Enhanced anti-Candida activity and mode of action of JII-R1, a jelleine-II peptide derivative of royal jelly origin

  Heliyon, 2025, Volume 11, Issue 15. ISSN 2405-8440. https://doi.org/10.1016/j.heliyon.2025.e44046.

• Cryo-EM uncovers a sequential mechanism for RNA polymerase I pausing and stalling at abasic DNA lesions

  Nat Commun. 2025 Jun 6;16(1):5254. doi: 10.1038/s41467-025-60536-4. PMID: 40480971; PMCID: PMC12144180.

• A nile red fluorescence assay for LC3 autophagy protein binding to lipid bilayers

  Sci Rep. 2025 Oct 3;15(1):34571. doi: 10.1038/s41598-025-18016-8. PMID: 41044149; PMCID: PMC12494833.

• Determining the Molecular Shape of Progesterone: Insights from Laser Ablation Rotational Spectroscopy

  J Phys Chem Lett. 2025 Feb 27:2425-2432. doi: 10.1021/acs.jpclett.4c03618. Epub ahead of print. PMID: 40013933.