Publications
2024
Machine learning guided prediction of warfarin blood levels for personalized medicine based on clinical longitudinal data from cardiac surgery patients: a prospective observational study
Int J Surg. 2024 Jun 4;110(10):6528–40. doi: 10.1097/JS9.0000000000001734. Epub ahead of print. PMID: 38833337; PMCID: PMC11487003.
Naturalize Revolution: Unprecedented AI-Driven Precision in Skin Cancer Classification Using Deep Learning
BioMedInformatics 2024, 4, 638-660. Doi: 10.3390/biomedinformatics4010035
The surface charge of electroactive materials governs cell behaviour through its effect on protein deposition
Acta Biomater. 2024 Aug;184:201-209. doi: 10.1016/j.actbio.2024.06.039. Epub 2024 Jun 29. PMID: 38950807.
Modulatory effects of CNNM4 on Protein-L-Isoaspartyl-O-Methyltransferase repair function during Alcohol-Induced hepatic damage
Hepatology. 2024 Dec 6. doi: 10.1097/HEP.0000000000001156. Epub ahead of print. PMID: 39641635.
Allosteric control of dynamin-related protein 1 through a disordered C-terminal Short Linear Motif
Nat Commun 15, 52. 2024. Doi:10.1038/s41467-023-44413-6
A Targetable N-Terminal Motif Orchestrates α-Synuclein Oligomer-to-Fibril Conversion
J Am Chem Soc. 2024 Apr 29. doi: 10.1021/jacs.4c02262. Epub ahead of print. PMID: 38683963.
Nucleocytoplasmic transport senses mechanical forces independently of cell density in cell monolayers
J Cell Sci. 2024 Sep 1;137(17):jcs262363. doi: 10.1242/jcs.262363. Epub 2024 Sep 9. PMID: 39120491; PMCID: PMC11423809.
The evolution of multiple colour mechanisms is correlated with diversification in sunbirds (Nectariniidae)
Syst Biol. 2024 Jan 30:syae006. doi: 10.1093/sysbio/syae006. Epub ahead of print. PMID: 38289860.
PCNA molecular recognition of different PIP motifs: Role of Tyr211 phosphorylation
Int J Biol Macromol. 2024 Jun 14:133187. doi: 10.1016/j.ijbiomac.2024.133187. Epub ahead of print. PMID: 38880460.
Enhancing MRI brain tumor classification: A comprehensive approach integrating real-life scenario simulation and augmentation techniques
Phys Med. 2024 Nov 2;127:104841. doi: 10.1016/j.ejmp.2024.104841. Epub ahead of print. PMID: 39488993.
Transformer-based fall detection in videos
Engineering Applications of Artificial Intelligence, Volume 132, 2024, 107937. Doi: 10.1016/j.engappai.2024.107937
Shape and interactions of the synthetic repellent DEET
Phys Chem Chem Phys. 2024 Sep 12. doi: 10.1039/d4cp02315c
Modulatory effects of CNNM4 on Protein-L-Isoaspartyl-O-Methyltransferase repair function during Alcohol-Induced hepatic damage
Hepatology. 2024 Dec 6. doi: 10.1097/HEP.0000000000001156. Epub ahead of print. PMID: 39641635.
OptiMo-LDLr: An Integrated In Silico Model with Enhanced Predictive Power for LDL Receptor Variants, Unraveling Hot Spot Pathogenic Residues
Adv Sci (Weinh). 2024 Jan 23:e2305177. doi: 10.1002/advs.202305177.
DL4MicEverywhere: Deep learning for microscopy made flexible, shareable, and reproducible
Nat Methods. 2024 May 17. doi: 10.1038/s41592-024-02295-6. Epub ahead of print. PMID: 38760611.
Towards self-conscious AI using deep ImageNet models: Application to blood cell classification
Mach. Learn. Knowl. Extr. 2024, 6(4), 2400-2421.
2025
Long-term memory in lipid assemblies: Rate-independent hysteresis in the ripple-to-liquid-disordered transition of sphingomyelin bilayers
J Chem Phys. 2025 Apr 7;162(13):135101. doi: 10.1063/5.0252051. PMID: 40167004.
Metabolic coordination and phase transitions in spatially distributed multi-cellular systems
Commun Phys 8, 205 (2025). https://doi.org/10.1038/s42005-025-02133-x
High power impulse magnetron sputtering deposited virucide and antibacterial CrN-Cu films and the durability of the antimicrobial activity
Heliyon. 2025 Jan 14;11(2):e41936. doi: 10.1016/j.heliyon.2025.e41936. PMID: 39897851; PMCID: PMC11787653.
Few-shot learning for non-vitrified ice segmentation
Sci Rep. 2025 Feb 14;15(1):5501. doi: 10.1038/s41598-025-86308-0. PMID: 39953118; PMCID: PMC11828963.
Actionable Forecasting as a Determinant of Biological Adaptation
Adv Sci (Weinh). 2025 Apr;12(16):e2413153. doi: 10.1002/advs.202413153. Epub 2025 Feb 27. PMID: 40017047; PMCID: PMC12021117.
Synchrotron-based correlative imaging of metals and proteins in neuronal cells: state of the art and future challenges in neurometallomics
Review. Metallomics. 2025 Feb 6;17(2):mfaf003. doi: 10.1093/mtomcs/mfaf003. PMID: 39890607.
Supramolecular chemistry in solution and solid–gas interfaces: Synthesis and Photophysical Properties of Monocolor and Bicolor Fluorescent Sensors for Barium Tagging in Neutrinoless Double Beta DecayDecay
RSC Appl. Interfaces, 2025. DOI 10.1039/D4LF00227J
Picrotoxin-Induced Epileptogenic Hippocampal Organotypic Slice Cultures (hOTCs)
Neural Stem Cells. Methods in Molecular Biology, vol 2899. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-4386-0_23.
Cryo-EM uncovers a sequential mechanism for RNA polymerase I pausing and stalling at abasic DNA lesions
Nat Commun. 2025 Jun 6;16(1):5254. doi: 10.1038/s41467-025-60536-4. PMID: 40480971; PMCID: PMC12144180.
Determining the Molecular Shape of Progesterone: Insights from Laser Ablation Rotational Spectroscopy
J Phys Chem Lett. 2025 Feb 27:2425-2432. doi: 10.1021/acs.jpclett.4c03618. Epub ahead of print. PMID: 40013933.
Enhancing Generalization and Mitigating Overfitting in Deep Learning for Brain Cancer Diagnosis from MRI
Appl Magn Reson 56, 359–394 (2025). https://doi.org/10.1007/s00723-024-01743-y
A mathematical model of CAR-T cell therapy in combination with chemotherapy for malignant gliomas
Chaos. 2025 Jun 1;35(6):063104. doi: 10.1063/5.0260252. PMID: 40455204.
The interaction of human serum components with model membranes containing phospholipids and lipopolysaccharides
J Colloid Interface Sci. 2025 Jun 15;688:150-160. doi: 10.1016/j.jcis.2025.02.131. Epub 2025 Feb 20. PMID: 39999488.
Neuroglia in neurodegeneration: Alzheimer, Parkinson, and Huntington disease
Review. Handb Clin Neurol. 2025;210:9-44. doi: 10.1016/B978-0-443-19102-2.00012-0. PMID: 40148060.
Electrophysiological dissection of the ion channel activity of the Pseudomonas aeruginosa ionophore protein toxin Tse5
Chem Phys Lipids. 2025 Mar;267:105472. doi: 10.1016/j.chemphyslip.2025.105472. Epub 2025 Jan 6. PMID: 39778700.
Chaperone-Driven Entropic Separation of Amyloid Nanofilament Bundles
Phys. Rev. X. 2025; 15;011041
The interaction of human serum components with model membranes containing phospholipids and lipopolysaccharides
J Colloid Interface Sci. 2025 Jun 15;688:150-160. doi: 10.1016/j.jcis.2025.02.131. Epub 2025 Feb 20. PMID: 39999488.
Quasi-average predictions and regression to the trend: An application to the M6 financial forecasting competition
International Journal of Forecasting, 2025. doi: 10.1016/j.ijforecast.2024.12.006
A transient contractile seam promotes epithelial sealing and sequential assembly of body segments
Nat Commun. 2025 Apr 29;16(1):4010. doi: 10.1038/s41467-025-58566-z. PMID: 40301337; PMCID: PMC12041241.
Genetic Analysis and Predictive Modeling of COVID-19 Severity in a Hospital-Based Patient Cohort
Biomolecules. 2025 Mar 10;15(3):393. doi: 10.3390/biom15030393. PMID: 40149929; PMCID: PMC11940120.
Viroporins: discovery, methods of study, and mechanisms of host-membrane permeabilization
Review. Q Rev Biophys. 2025 Jan 14;58:e1. doi: 10.1017/S0033583524000192. PMID: 39806799.
Structural recognition and stabilization of tyrosine hydroxylase by the J-domain protein DNAJC12
Nat Commun. 2025 Mar 20;16(1):2755. doi: 10.1038/s41467-025-57733-6. PMID: 40113792; PMCID: PMC11926245.
Exploring the Anti-Chagas Activity of Zanthoxylum chiloperone's Seedlings Through Metabolomics and Protein-Ligand Docking
Plants (Basel). 2025 Mar 18;14(6):954. doi: 10.3390/plants14060954. PMID: 40265836; PMCID: PMC11946004.
Drug Release Nanoparticle Systems Design: Dataset Compilation and Machine Learning Modeling
ACS Applied Materials and Interfaces. Volume 17, Issue 3, Pages 5290 - 5306